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Obo? A Basic Definition

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Off-site Obo Links, User Submitted

The following links have been collected through user bookmark submission in the Obo category. Please note, because these resources are off-site we cannot guarantee the accuracy or quality of any information.

Fri Jul 3

• The Terminizer - Assisted Detection Of Ontological Terms: Online tool that automatically detects ontological terms in free text and add semantic markup.

Thu Jul 2

• Bio2RDF sparql endpoint for OBO

Wed Jul 1

• Computational Bioscience at the School of Medicine, UC Colorado Denver: The Computational Bioscience Program brings a pioneering new approach to computation that advances human health and the molecular understanding of life. Founded and directed by Prof. Lawrence Hunter, the Program is globally recognized for its research and teaching of computational biology and bioinformatics at the University of Colorado?s Anschutz Medical Campus.

Tue Jun 30

• Bio2RDF version of OBO database (http://www.ob ofoundry.org/): The OBO Foundry is a collaborative experiment involving developers of science-based ontologies who are establishing a set of principles for ontology development with the goal of creating a suite of orthogonal interoperable reference ontologies in the biomedical domain. The groups developing ontologies who have expressed an interest in this goal are listed below, followed by other relevant efforts in this domain.
• OBOTools - co-ode-owl-plu gins - A set of tools to aid OBO editors - Google Code: A very simple little hierarchy view that filters out the top level deprecated classes using a set of extensions to Protege that make it easier for OBO ontology developers to find their way around and edit OBO ontologies in OWL. In the OBO2OWL translation obsoleted terms have no parents and are marked with an annotation to say that they have been deprecated. This means they can get in the way when tools don't take them into account.
• Shared Names

Fri Jun 19

• 1984 G20 Chevy conversion van - $500 OBO: 1984 G20 Chevy conversion van - $500 OBO
• 1995 DODGE CARAVN 7 PASSNGER V6 - $950 OBO: 1995 DODGE CARAVN 7 PASSNGER V6 $950 OBO
• OBO to SKOS (Simon Jupp - The University of Manchester)
• http://www.ber keleybop.org/o bo-conv.cgi

Thu Jun 18

• The Open Biomedical Ontologies

Tue Jun 16

• To Fight Infectious Disease, Medical Research Turns To Philosophy -- and Buffalo - UB NewsCenter: UB ontology experts help clinicians and researchers speak the same "language ". Interest in UB philosopher Barry Smith's new approach to ontology has spurred the development of UB as an international center; it also is beginning to attract to Buffalo information technology firms eager to collaborate. To tackle an increasing global infectious disease burden and rising rates of drug-resistant infections, University at Buffalo philosophers are working with medical researchers to develop the first-ever infectious disease ontology. Ontology is the science of how things are classified and the relationships between them. When researchers in biology and medicine use ontology classification s, they are able to speak the same "language ."

Sun Jun 7

• OBO Foundry Workshop 2009: outcomes, Day 1, sunday - OBOFoundry: Summary of Sunday, June 7th, 2009

Off-site Obo Research Links

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